Detection of H1N1 Sequence Alignment with Basic Local Alignment Search
Keywords:
Swine Influenza, H1N1 Virus, Sequence AlignmentAbstract
Bioinformatics is a science that studies the management and analysis of biological information. Bioinformatics includes application of mathematics, statistics, and informatics to biological problems to solve. Bioinformatics can store data generated by the genome project with regular and high degree of accuracy. Basic local alignment search is one of the methods used to process penyejajaran molecular data sequences. In 2009, there is a virus that attacks the respiratory tract that is the swine flu. The virus is spread around the world, so that retrieved the journal research on diverse virus DNA sequences in different endemic countries. Therefore, in this study will be explained about the process sequence alignment of the H1N1 swine flu virus. H1N1 Weiss AF 250365.2 and H1N1 Swine AF250364.2 have 90% similarity level.
Downloads
References
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990). Basic local alignment search tool. Journal of molecular biology, 215(3), 403-410.
Gavaskar, B. (2010). Present Investigations and New Allments od Swine Flu. International Journal of Pharmacy and Life Sciences Vol 1 No 6, 316-324.
Ge, Y., Cui, L., Qi, X., Shan, J., Shan, Y., Qi, Y., ... & Shi, Z. (2010). Detection of novel swine origin influenza A virus (H1N1) by real-time nucleic acid sequence-based amplification. Journal of virological methods, 163(2), 495-497.
Hariyadi, B. (2011). Penggunaan GenBank NCBI dan Program Mega 4.0 untuk Penelitian dan Peningkatan Pembelajaran Biologi di Sekolah dan Perguruan Tinggi. Jurnal Pengabdian pada Masyarakat No 52, 55-60.
Krauthammer, M. (2000). Using BLAST for Identifying Gene and Protein Names. An International Journal Gene Genomes and Evolution, 245-252.
Kumalasari, F. (2011, November 2). Epidemiologi Penyakit Swine Influenza. Retrieved from Epidemiologi: http://epidemiologiunsri.blogspot.co.id/2011/11/swine-influenza-flu-babi.html
Narita, V. (2012). Analisis Bioinformatika Berbasis WEB untuk Eksplorasi Enzim Kitosanase Berdasarkan Kemiripan Sekuens. Jurnal Al Azhar Indonesia Seri Sains dan Teknologi Vol 1 No 4, 197-203.
Rewar, S. (2015). Outbreak of Swine-Origin Influenza A(H1N1) Virus. International Journal of Research in Pharmacy and Biosciences. Vol 2, 5-11.
Downloads
Published
Issue
Section
License
Copyright (c) 2024 Journal of Information Technology, Computer Engineering and Artificial Intelligence (ITCEA)
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.
